Anatomical

Summary

Anatomical Conformation

Skull stripped T1

Stripped T1 placed over an image of the unstripped T1


ANTS BrainExtraction: brain mask over anatomical input




Filename: reportlets/fmriprep/sub-387/anat/sub-387_T1w_t1_skull_strip.html

T1 segmentation


FAST: segmentation over anatomical




Filename: reportlets/fmriprep/sub-387/anat/sub-387_T1w_t1w_dseg.html

T1 to MNI registration

Corrected anatomical T1 image registered into MNI space



Filename: reportlets/fmriprep/sub-387/anat/sub-387_T1w_t1_2_mni.svg

Surface reconstruction

White and pial surfaces overlaid on T1 image



Filename: reportlets/fmriprep/sub-387/anat/sub-387_T1w_reconall.html

Functional

Reports for Task: rest

Summary

Susceptibility distortion correction (No fieldmaps)

Results of performing SyN-based SDC on the EPI



Filename: reportlets/fmriprep/sub-387/func/sub-387_task-rest_bold_syn_sdc.svg

Skull stripped EPI

Skull stripped EPI


Brain mask




Filename: reportlets/fmriprep/sub-387/func/sub-387_task-rest_bold_epi_mask.html

EPI to T1 registration

EPI was used to generate transformations from EPI space to T1 Space



Filename: reportlets/fmriprep/sub-387/func/sub-387_task-rest_bold_bbr.svg

aCompCor ROI

Conservative CSF and white matter mask for extracting physiological and movement confounds.


aCompCor ROI




Filename: reportlets/fmriprep/sub-387/func/sub-387_task-rest_bold_acompcor.html

tCompCor high variance map

Top 5% most variable voxels within heavily eroded brain mask.


tCompCor - high variance voxels




Filename: reportlets/fmriprep/sub-387/func/sub-387_task-rest_bold_tcompcor.html

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